Flexodeal (Lite)
v1.3.2
A 3D musculoskeletal simulation library
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Here is a list of all variables with links to the classes they belong to:
- a -
A :
Flexodeal::Solid< dim >::PerTaskData_SC
activation_function :
Flexodeal::Solid< dim >
- b -
B :
Flexodeal::Solid< dim >::PerTaskData_SC
b_bar :
Flexodeal::Muscle_Tissues_Three_Field< dim >
- c -
C :
Flexodeal::Solid< dim >::PerTaskData_SC
c1_basematerial_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
c2_basematerial_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
c3_basematerial_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
cell_matrix :
Flexodeal::Solid< dim >::PerTaskData_ASM
,
Flexodeal::Solid< dim >::PerTaskData_SC
cell_rhs :
Flexodeal::Solid< dim >::PerTaskData_ASM
constraints :
Flexodeal::Solid< dim >
- d -
d2Psi_vol_dJ2 :
Flexodeal::PointHistory< dim >
degree :
Flexodeal::Solid< dim >
delta_t :
Flexodeal::Muscle_Tissues_Three_Field< dim >
,
Flexodeal::Parameters::Time
,
Flexodeal::Time
det_F :
Flexodeal::Muscle_Tissues_Three_Field< dim >
displacement :
Flexodeal::PointHistory< dim >
displacement_previous :
Flexodeal::PointHistory< dim >
dof_handler :
Flexodeal::Solid< dim >
dofs_per_block :
Flexodeal::Solid< dim >
dofs_per_cell :
Flexodeal::Solid< dim >
dPsi_vol_dJ :
Flexodeal::PointHistory< dim >
- e -
element_indices_J :
Flexodeal::Solid< dim >
element_indices_p :
Flexodeal::Solid< dim >
element_indices_u :
Flexodeal::Solid< dim >
end_time :
Flexodeal::Parameters::Time
error_residual :
Flexodeal::Solid< dim >
error_residual_0 :
Flexodeal::Solid< dim >
error_residual_norm :
Flexodeal::Solid< dim >
error_update :
Flexodeal::Solid< dim >
error_update_0 :
Flexodeal::Solid< dim >
error_update_norm :
Flexodeal::Solid< dim >
- f -
F_inv :
Flexodeal::PointHistory< dim >
F_previous :
Flexodeal::PointHistory< dim >
fe :
Flexodeal::Solid< dim >
fe_face_values :
Flexodeal::Solid< dim >::ScratchData_ASM
fe_values :
Flexodeal::Solid< dim >::ScratchData_ASM
,
Flexodeal::Solid< dim >::ScratchData_UQPH
fibre_time_activation :
Flexodeal::Muscle_Tissues_Three_Field< dim >
first_u_component :
Flexodeal::Solid< dim >
- g -
global_dof_index_u_left :
Flexodeal::Solid< dim >
global_dof_index_u_mid :
Flexodeal::Solid< dim >
global_dof_index_u_right :
Flexodeal::Solid< dim >
global_refinement :
Flexodeal::Parameters::Geometry
grad_displacement :
Flexodeal::PointHistory< dim >
grad_Nx :
Flexodeal::Solid< dim >::ScratchData_ASM
grad_velocity :
Flexodeal::PointHistory< dim >
- h -
height :
Flexodeal::Parameters::Geometry
- i -
initial_fibre_orientation :
Flexodeal::Muscle_Tissues_Three_Field< dim >
- j -
J :
Flexodeal::Solid< dim >::Errors
J_component :
Flexodeal::Solid< dim >
J_fe :
Flexodeal::Solid< dim >
J_tilde :
Flexodeal::Muscle_Tissues_Three_Field< dim >
Jc :
Flexodeal::PointHistory< dim >
- k -
k_bbar :
Flexodeal::Solid< dim >::PerTaskData_SC
k_JJ :
Flexodeal::Solid< dim >::PerTaskData_SC
k_orig :
Flexodeal::Solid< dim >::PerTaskData_SC
k_pJ :
Flexodeal::Solid< dim >::PerTaskData_SC
k_pJ_inv :
Flexodeal::Solid< dim >::PerTaskData_SC
k_pu :
Flexodeal::Solid< dim >::PerTaskData_SC
kappa_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
,
Flexodeal::Parameters::MuscleProperties
- l -
length :
Flexodeal::Parameters::Geometry
list_of_boundary_ids :
Flexodeal::Solid< dim >
local_dof_indices :
Flexodeal::Solid< dim >::PerTaskData_ASM
,
Flexodeal::Solid< dim >::PerTaskData_SC
- m -
material :
Flexodeal::PointHistory< dim >
max_iso_stress_basematerial :
Flexodeal::Parameters::MuscleProperties
max_iso_stress_muscle :
Flexodeal::Parameters::MuscleProperties
max_iterations_lin :
Flexodeal::Parameters::LinearSolver
max_iterations_NR :
Flexodeal::Parameters::NonlinearSolver
max_strain_rate :
Flexodeal::Parameters::MuscleProperties
muscle_basemat_c1 :
Flexodeal::Parameters::MuscleProperties
muscle_basemat_c2 :
Flexodeal::Parameters::MuscleProperties
muscle_basemat_c3 :
Flexodeal::Parameters::MuscleProperties
muscle_basematerial_factor :
Flexodeal::Parameters::MuscleProperties
muscle_density :
Flexodeal::Parameters::MuscleProperties
muscle_fibre_orientation_x :
Flexodeal::Parameters::MuscleProperties
muscle_fibre_orientation_y :
Flexodeal::Parameters::MuscleProperties
muscle_fibre_orientation_z :
Flexodeal::Parameters::MuscleProperties
- n -
n_blocks :
Flexodeal::Solid< dim >
n_components :
Flexodeal::Solid< dim >
n_q_points :
Flexodeal::Solid< dim >
n_q_points_f :
Flexodeal::Solid< dim >
norm :
Flexodeal::Solid< dim >::Errors
Nx :
Flexodeal::Solid< dim >::ScratchData_ASM
- o -
orientation :
Flexodeal::Muscle_Tissues_Three_Field< dim >
- p -
p :
Flexodeal::Solid< dim >::Errors
p_component :
Flexodeal::Solid< dim >
p_fe :
Flexodeal::Solid< dim >
p_p0 :
Flexodeal::Parameters::Geometry
p_tilde :
Flexodeal::Muscle_Tissues_Three_Field< dim >
parameters :
Flexodeal::Solid< dim >
poly_degree :
Flexodeal::Parameters::FESystem
preconditioner_relaxation :
Flexodeal::Parameters::LinearSolver
preconditioner_type :
Flexodeal::Parameters::LinearSolver
prm :
Flexodeal::Parameters::AllParameters
pulling_face_id :
Flexodeal::Parameters::PrescribedDisplacement
- q -
qf_cell :
Flexodeal::Solid< dim >
qf_face :
Flexodeal::Solid< dim >
quad_order :
Flexodeal::Parameters::FESystem
quadrature_point_history :
Flexodeal::Solid< dim >
- s -
s_base_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
save_dir :
Flexodeal::Solid< dim >
scale :
Flexodeal::Parameters::Geometry
sigma_naught_basematerial :
Flexodeal::Muscle_Tissues_Three_Field< dim >
sigma_naught_muscle :
Flexodeal::Muscle_Tissues_Three_Field< dim >
solution_grads_u_total :
Flexodeal::Solid< dim >::ScratchData_UQPH
solution_n :
Flexodeal::Solid< dim >
solution_total :
Flexodeal::Solid< dim >::ScratchData_UQPH
solution_values_J_total :
Flexodeal::Solid< dim >::ScratchData_UQPH
solution_values_p_total :
Flexodeal::Solid< dim >::ScratchData_UQPH
solution_values_u_total :
Flexodeal::Solid< dim >::ScratchData_UQPH
sparsity_pattern :
Flexodeal::Solid< dim >
strain_rate_bar :
Flexodeal::Muscle_Tissues_Three_Field< dim >
strain_rate_naught :
Flexodeal::Muscle_Tissues_Three_Field< dim >
stretch_bar :
Flexodeal::Muscle_Tissues_Three_Field< dim >
symm_grad_Nx :
Flexodeal::Solid< dim >::ScratchData_ASM
system_rhs :
Flexodeal::Solid< dim >
- t -
table_values :
Flexodeal::TabularFunction
tangent_matrix :
Flexodeal::Solid< dim >
tau :
Flexodeal::PointHistory< dim >
tau_iso :
Flexodeal::PointHistory< dim >
tau_iso_muscle_active :
Flexodeal::PointHistory< dim >
tau_iso_muscle_basematerial :
Flexodeal::PointHistory< dim >
tau_iso_muscle_passive :
Flexodeal::PointHistory< dim >
tau_vol :
Flexodeal::PointHistory< dim >
time :
Flexodeal::Solid< dim >
time_current :
Flexodeal::Time
time_end :
Flexodeal::Time
time_previous :
Flexodeal::Time
timer :
Flexodeal::Solid< dim >
timestep :
Flexodeal::Time
tol_f :
Flexodeal::Parameters::NonlinearSolver
tol_lin :
Flexodeal::Parameters::LinearSolver
tol_u :
Flexodeal::Parameters::NonlinearSolver
trace_b_bar :
Flexodeal::Muscle_Tissues_Three_Field< dim >
triangulation :
Flexodeal::Solid< dim >
type_lin :
Flexodeal::Parameters::LinearSolver
type_nonlinear_solver :
Flexodeal::Parameters::NonlinearSolver
type_of_contraction :
Flexodeal::Muscle_Tissues_Three_Field< dim >
type_of_simulation :
Flexodeal::Parameters::FESystem
- u -
u :
Flexodeal::Solid< dim >::Errors
u_dir :
Flexodeal::Solid< dim >
u_dir_n :
Flexodeal::IncrementalDisplacement< dim >
u_dir_n_1 :
Flexodeal::IncrementalDisplacement< dim >
u_fe :
Flexodeal::Solid< dim >
use_static_condensation :
Flexodeal::Parameters::LinearSolver
- v -
vector_Nx :
Flexodeal::Solid< dim >::ScratchData_ASM
velocity_previous :
Flexodeal::PointHistory< dim >
vol_reference :
Flexodeal::Solid< dim >
- w -
width :
Flexodeal::Parameters::Geometry
- x -
x_left :
Flexodeal::Parameters::MeasuringLocations
x_mid :
Flexodeal::Parameters::MeasuringLocations
x_right :
Flexodeal::Parameters::MeasuringLocations
- y -
y_left :
Flexodeal::Parameters::MeasuringLocations
y_mid :
Flexodeal::Parameters::MeasuringLocations
y_right :
Flexodeal::Parameters::MeasuringLocations
- z -
z_left :
Flexodeal::Parameters::MeasuringLocations
z_mid :
Flexodeal::Parameters::MeasuringLocations
z_right :
Flexodeal::Parameters::MeasuringLocations
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